The Limitation of the Combination of Transition State Theory and Thermodynamics for the Reactions of Proteins and Nucleic Acids

Biomolecules. 2021 Dec 25;12(1):28. doi: 10.3390/biom12010028.

Abstract

When a reaction is accompanied by a change with the speed close to or slower than the reaction rate, a circulating reaction flow can exist among the reaction states in the macroscopic stationary state. If the accompanying change were at equilibrium in the timescale of the relevant reaction, the transition-state theory would hold to eliminate the flow.

Keywords: chemical ratchet; detailed balance; kinetics; rate equation; reaction theory; thermal equilibrium; transition-state theory.

MeSH terms

  • Kinetics
  • Models, Chemical
  • Nucleic Acids*
  • Proteins / metabolism
  • Thermodynamics

Substances

  • Nucleic Acids
  • Proteins