Biosynthesis and Genetic Incorporation of 3,4-Dihydroxy-L-Phenylalanine into Proteins in Escherichia coli

J Mol Biol. 2022 Apr 30;434(8):167412. doi: 10.1016/j.jmb.2021.167412. Epub 2021 Dec 20.

Abstract

While 20 canonical amino acids are used by most organisms for protein synthesis, the creation of cells that can use noncanonical amino acids (ncAAs) as additional protein building blocks holds great promise for preparing novel medicines and for studying complex questions in biological systems. However, only a small number of biosynthetic pathways for ncAAs have been reported to date, greatly restricting our ability to generate cells with ncAA building blocks. In this study, we report the creation of a completely autonomous bacterium that utilizes 3,4-dihydroxy-L-phenylalanine (DOPA) as its 21st amino acid building block. Like canonical amino acids, DOPA can be biosynthesized without exogenous addition and can be genetically incorporated into proteins in a site-specific manner. Equally important, the protein production yields of DOPA-containing proteins from these autonomous cells are greater than those from cells exogenously fed with 9 mM DOPA. The unique catechol moiety of DOPA can be used as a versatile handle for site-specific protein functionalizations via either oxidative coupling or strain-promoted oxidation-controlled cyclooctyne-1,2-quinone (SPOCQ) cycloaddition reactions. We further demonstrate the use of these autonomous cells in preparing fluorophore-labeled anti-human epidermal growth factor 2 (HER2) antibodies for the detection of HER2 expression on cancer cells.

Keywords: biosynthesis; dihydroxyphenylalanine; genetic code expansion; oxidative coupling; site-specific conjugation.

MeSH terms

  • Antibodies
  • Breast Neoplasms / metabolism
  • Cell Engineering*
  • Dihydroxyphenylalanine* / genetics
  • Dihydroxyphenylalanine* / metabolism
  • Escherichia coli* / genetics
  • Escherichia coli* / metabolism
  • Genetic Code
  • Humans
  • Protein Biosynthesis*
  • Receptor, ErbB-2 / analysis
  • Receptor, ErbB-2 / immunology

Substances

  • Antibodies
  • Dihydroxyphenylalanine
  • ERBB2 protein, human
  • Receptor, ErbB-2