Streptococcus pneumoniae Serotypes Associated with Death, South Africa, 2012-2018

Emerg Infect Dis. 2022 Jan;28(1):166-179. doi: 10.3201/eid2801.210956.

Abstract

The Streptococcus pneumoniae polysaccharide capsule plays a role in disease severity. We assessed the association of serotype with case-fatality ratio (CFR) in invasive pneumococcal disease (IPD) and meningitis in South Africa, 2012-2018 (vaccine era), using multivariable logistic regression by manual backward elimination. The most common serotypes causing IPD were 8 and 19A. In patients <15 years of age, serotypes associated with increased CFR in IPD, compared with serotype 8 and controlling for confounding factors, were 11A, 13, 19F, 15A, and 6A. None of these serotypes were associated with increased CFR in meningitis. Among IPD patients >15 years of age, serotype 15B/C was associated with increased CFR. Among meningitis patients of all ages, serotype 1 was associated with increased CFR. PCV13 serotypes 1, 3, 6A, 19A, and 19F should be monitored, and serotypes 8, 12F, 15A, and 15B/C should be considered for inclusion in vaccines to reduce deaths caused by S. pneumoniae.

Keywords: South Africa; Streptococcus; Streptococcus pneumoniae; Switzerland; bacteria; case-fatality ratio; meningitis/encephalitis; mortality; polysaccharide capsule; serotype; streptococci.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Humans
  • Infant
  • Pneumococcal Infections* / epidemiology
  • Pneumococcal Vaccines
  • Serogroup
  • South Africa / epidemiology
  • Streptococcus pneumoniae*

Substances

  • Pneumococcal Vaccines