m6A target microRNAs in serum for cancer detection

Mol Cancer. 2021 Dec 20;20(1):170. doi: 10.1186/s12943-021-01477-6.

Abstract

Recent studies have revealed the significant dysregulation of m6A level in peripheral blood in several cancer types and its value in diagnosis. Nonetheless, a biomarker for accurate screening of multiple cancer types has not been established based on the perspective of m6A modification. In this study, we aimed to develop a serum diagnostic signature based on the m6A target miRNAs for the mass detection of cancer. A total of 14965 serum samples with 12 cancer types were included. Based on training cohort (n=7299), we developed the m6A-miRNAs signature using a support vector machine algorithm for cancer detection. The m6A-miRNAs signature showed high accuracy, and its area under the curve (AUC) in the training, internal validation and external validation cohort reached 0.979 (95%CI 0.976 - 0.982), 0.976 (95%CI 0.973 - 0.979) and 0.936 (95%CI 0.922 - 0.951), respectively. In the performance of distinguishing cancer types, the m6A-miRNAs signature showed superior sensitivity in each cancer type and presented a satisfactory AUC in identifying lung cancer, gastric cancer and hepatocellular carcinoma. Additionally, the diagnostic performance of m6A-miRNAs was not interfered by the gender, age and benign disease. In short, this study revealed the value of serum circulating m6A miRNAs in cancer detection and provided a new direction and strategy for the development of novel biomarkers with high accuracy, low cost and less invasiveness for mass cancer screening, such as RNA modification.

Keywords: Diagnosis; Liquid biopsy; Pan-cancer; m6A; microRNA.

Publication types

  • Letter
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine / analogs & derivatives*
  • Adenosine / metabolism
  • Biomarkers, Tumor*
  • Circulating MicroRNA*
  • Computational Biology / methods
  • Diagnosis, Differential
  • Gene Expression Profiling
  • Humans
  • Liquid Biopsy
  • MicroRNAs / blood
  • MicroRNAs / genetics*
  • Neoplasms / blood
  • Neoplasms / diagnosis*
  • Neoplasms / genetics*
  • Prognosis
  • ROC Curve
  • Reproducibility of Results

Substances

  • Biomarkers, Tumor
  • Circulating MicroRNA
  • MicroRNAs
  • N-methyladenosine
  • Adenosine