Comparative analysis of Phytophthora genomes data

Rui-Fang Gao; Jie-Yu Wang; Ke-Wei Liu; Zhi-Wen Wang; Diyang Zhang; Xiang Zhao; Wen-Ying Zhong; Wen-Chieh Tsai; Zhong-Jian Liu; Gui-Ming Zhang

doi:10.1016/j.dib.2021.107663

Comparative analysis of Phytophthora genomes data

Data Brief. 2021 Dec 2:39:107663. doi: 10.1016/j.dib.2021.107663. eCollection 2021 Dec.

Authors

Rui-Fang Gao^{1

2}, Jie-Yu Wang^{3

4}, Ke-Wei Liu⁵, Zhi-Wen Wang⁶, Diyang Zhang³, Xiang Zhao⁶, Wen-Ying Zhong⁶, Wen-Chieh Tsai^{7

8

9}, Zhong-Jian Liu^{3

10

11}, Gui-Ming Zhang^{1

2}

Affiliations

¹ Animal & Plant Inspection and Quarantine Technology Center of Shenzhen Customs District P.R. China, Shenzhen 518045, China.
² Shenzhen Key Laboratory for Research & Development on Detection Technology of Alien Pests, Shenzhen Academy of Inspection and Quarantine, Shenzhen 518045, China.
³ Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
⁴ Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
⁵ Tsinghua-Berkeley Shenzhen Institute (TBSI), Center for Biotechnology and Biomedicine, Shenzhen Key Laboratory of Gene and Antibody Therapy, State Key Laboratory of Chemical Oncogenomics, State Key Laboratory of Health Sciences and Technology, Institute of Biopharmaceutical and Health Engineering (iBHE), Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, China.
⁶ PubBio-Tech Services Corporation, Wuhan 430070, China.
⁷ Orchid Research and Development Center, National Cheng Kung University, Tainan 701, Taiwan.
⁸ Department of Life Sciences, National Cheng Kung University, Tainan 701, Taiwan.
⁹ Institute of Tropical Plant Sciences and Microbiology, National Cheng Kung University, Tainan 701, Taiwan.
¹⁰ Institute of Vegetable and Flowers, Shandong Academy of Agricultural Sciences, 250100, Jinan, China.
¹¹ Zhejiang Institute of Subtropical Crops, Zhejiang Academy of Agricultural Sciences, Wenzhou 325005, China.

Abstract

The data presented here are related to the article entitled "Comparative analysis of Phytophthora genomes reveals oomycete pathogenesis in crops" [1]. These data contain the description of genomic structure of the two plant pathogens, P. fragariae and P. rubi and characterize several gene families associated with pathogenicity of them: P450, ACX gene families, CAZymes and effector. This data presents the relevant results of two newly sequenced P. fragariae and P. rubi, so as to provide data for further studies by researchers.

Keywords: Phytophthora fragariae; Phytophthora rubi; pathogenic gene families.