Metagenomic analysis reveals the response of microbial community in river sediment to accidental antimony contamination

Sci Total Environ. 2022 Mar 20:813:152484. doi: 10.1016/j.scitotenv.2021.152484. Epub 2021 Dec 16.

Abstract

The mining of deposits containing metals like antimony (Sb) causes serious environmental issues that threaten human health and ecological systems. However, information on the effect of Sb on freshwater sediment microorganisms and the mechanism of microbial Sb resistance is still very limited. This was the first attempt to explore microbial communities in river sediments impacted by accidental Sb spill. Metagenomic analysis revealed the high relative abundance of Proteobacteria and Actinobacteria in all the studied river sediments, showing their advantage in resistance to Sb pollution. Under Sb stress, microbial functions related to DNA repair and ion transport were enhanced. Increase in heavy metal resistance genes (HMRGs), particularly Sb transport-related arsB gene, was observed at Sb spill-impacted sites. HMRGs were significantly correlated with ARGs and MGEs, and the abundant MGEs at Sb spill-impacted sites might contribute to the increase in HMRGs and ARGs via horizontal gene transfer. Deinococcus, Sphingopyxis and Paracoccus were identified as potential tolerant genera under Sb pressure and might be related to the transmission of HMRGs and ARGs. This study can add new insights towards the effect of accidental metal spill on sediment microbial community.

Keywords: Antibiotic resistance genes; Antimony; Heavy metal resistance genes; Microbial community; River sediment.

MeSH terms

  • Anti-Bacterial Agents
  • Antimony / analysis
  • Antimony / toxicity
  • Genes, Bacterial
  • Humans
  • Metagenomics
  • Metals, Heavy*
  • Microbiota*
  • Rivers

Substances

  • Anti-Bacterial Agents
  • Metals, Heavy
  • Antimony