Binding mechanism of lipase with Lentinus edodes mycelia polysaccharide by multi-spectroscopic methods

J Mol Recognit. 2022 Feb;35(2):e2946. doi: 10.1002/jmr.2946. Epub 2021 Dec 17.

Abstract

It is an effective strategy to avoid obesity by inhibiting the activity of lipase. In this study, the binding mechanism of lipase and Lentinus edodes mycelia polysaccharide (LMP) were explored with multi-spectral methods, for example, three-dimensional (3D) fluorescence, Fourier-transformed infrared (FT-IR), and Raman spectra. At 290 K, the binding constant was 2.44 × 105 L/mol, there was only one binding site between LMP and lipase. Static quenching was the quenching mechanism. The major forces were hydrogen bonding and van der Waals force. The binding of LMP to lipase impacted the microenvironment around tyrosine and tryptophan residues. The polarity around these residues was decreased and hydrophobicity was enhanced. This study not only revealed the binding mechanism of LMP on lipase but also provided scientific evidence for expanding the application of LMP in functional food industries.

Keywords: Lentinus edodes mycelia polysaccharide; conformation; interaction; lipase; spectroscopy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Hydrogen Bonding
  • Lipase
  • Molecular Docking Simulation
  • Polysaccharides
  • Protein Binding
  • Shiitake Mushrooms* / chemistry
  • Spectrometry, Fluorescence / methods
  • Spectroscopy, Fourier Transform Infrared
  • Thermodynamics

Substances

  • Polysaccharides
  • Lipase