Comparative transcriptome and metabolome analysis reveal glutathione metabolic network and functional genes underlying blue and red-light mediation in maize seedling leaf

BMC Plant Biol. 2021 Dec 14;21(1):593. doi: 10.1186/s12870-021-03376-w.

Abstract

Background: Light quality severely affects biosynthesis and metabolism-associated process of glutathione. However, the role of specific light is still unclear on the glutathione metabolism. In this article, comparatively transcriptome and metabolome methods are used to fully understand the blue and red-light conditions working on the glutathione metabolism in maize seedling leaf.

Results: There are 20 differently expressed genes and 4 differently expressed metabolites in KEGG pathway of glutathione metabolism. Among them, 12 genes belong to the glutathione S-transferase family, 3 genes belong to the ascorbate peroxidase gene family and 2 genes belong to the ribonucleoside-diphosphate reductase gene family. Three genes, G6PD, SPDS1, and GPX1 belong to the gene family of glucose 6-phosphate dehydrogenase, spermidine synthase, and glutathione peroxidase, respectively. Four differently expressed metabolites are identified. Three of them, Glutathione disulfide, Glutathione, and l-γ-Glutamyl-L-amino acid are decreased while L-Glutamate is increased. In addition, Through PPI analysis, two annotated genes gst16 and DAAT, and 3 unidentified genes 100381533, pco105094 and umc2770, identified as RPP13-like3, BCAT-like1and GMPS, were obtained. By the analysis of protein sequence and PPI network, we predict that pco105094 and umc2770 were involved in the GSSG-GSH and AsA-GSH cycle in the network of glutathione metabolism.

Conclusions: Compared to red light, blue light remarkably changed the transcription signal transduction and metabolism of glutathione metabolism. Differently expressed genes and metabolic mapped to the glutathione metabolism signaling pathways. In total, we obtained three unidentified genes, and two of them were predicted in current glutathione metabolism network. This result will contribute to the research of glutathione metabolism of maize.

Keywords: Blue light; Glutathione; Metabolome; Red light; Transcriptome; Zea mays.

Publication types

  • Comparative Study

MeSH terms

  • Gene Expression Regulation, Plant
  • Genes, Plant
  • Glutathione / metabolism*
  • Light
  • Metabolic Networks and Pathways / genetics*
  • Metabolome
  • Plant Leaves / enzymology
  • Plant Leaves / metabolism
  • Plant Leaves / radiation effects
  • Plant Proteins / chemistry
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Protein Conformation
  • Seedlings / metabolism
  • Seedlings / radiation effects
  • Transcriptome
  • Zea mays / enzymology
  • Zea mays / genetics
  • Zea mays / metabolism*
  • Zea mays / radiation effects*

Substances

  • Plant Proteins
  • Glutathione