Dynamic Structural Changes and Thermodynamics in Phase Separation Processes of an Intrinsically Disordered-Ordered Protein Model

Angew Chem Int Ed Engl. 2022 Jan 17;61(3):e202112738. doi: 10.1002/anie.202112738. Epub 2021 Dec 6.

Abstract

Elastin-like proteins (ELPs) are biologically important proteins and models for intrinsically disordered proteins (IDPs) and dynamic structural transitions associated with coacervates and liquid-liquid phase transitions. However, the conformational status below and above coacervation temperature and its role in the phase separation process is still elusive. Employing matrix least-squares global Boltzmann fitting of the circular dichroism spectra of the ELPs (VPGVG)20 , (VPGVG)40 , and (VPGVG)60 , we found that coacervation occurs sharply when a certain number of repeat units has acquired β-turn conformation (in our sequence setting a threshold of approx. 20 repeat units). The character of the differential scattering of the coacervate suspensions indicated that this fraction of β-turn structure is still retained after polypeptide assembly. Such conformational thresholds may also have a role in other protein assembly processes with implications for the design of protein-based smart materials.

Keywords: circular dichroism; elastin-like proteins; intrinsically disordered proteins; matrix least-squares global fitting; protein assembly.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Circular Dichroism
  • Humans
  • Intrinsically Disordered Proteins / chemistry*
  • Intrinsically Disordered Proteins / metabolism
  • Models, Molecular
  • Peptides / chemistry*
  • Peptides / metabolism
  • Protein Conformation
  • Thermodynamics*

Substances

  • Intrinsically Disordered Proteins
  • Peptides
  • endozepine-like peptide ELP