Development of a one-plasmid system to replace the endogenous protein with point mutation for post-translational modification studies

Mol Biol Rep. 2022 Jan;49(1):1-7. doi: 10.1007/s11033-021-06693-3. Epub 2021 Nov 11.

Abstract

Background: Post-translational modification (PTM) is one of the major regulatory mechanism for protein activities. To understand the function of PTMs, mutants that prevent or mimic the modification are frequently utilized. The endogenous proteins are usually depleted while the point mutations are expressed. A common strategy to accomplish these tasks includes two-steps: First, a cell line stably expressing shRNA for protein depletion is generated, then an RNAi-resistance construct is introduced to express mutant. However, these steps are time- and labor-consuming. More importantly, shRNA and mutant protein are frequently expressed in different cells at different time, which significantly disturbs the conclusions.

Methods: To overcome these technical problems, we developed a lentiviral based one-plasmid system that allowed concurrent expression of shRNA and mutant protein. The puromycin-resistant gene was inserted for the selection of stable-expression cells.

Results: Using this plasmid, we efficiently replaced the endogenous proteins with comparable levels of exogenous proteins for LDHB and PKM2, two glycolytic enzymes regulated by PTM in cancer cells. The system was also successfully exploited in evaluating the role of phosphorylation of LDHB serine 162 in multiple in vitro and in vivo assays.

Conclusion: Thus, we have developed an efficient one-plasmid system to replace endogenous protein with point mutations for the functional study of PTM.

Keywords: Knockdown; PTM; Point mutation; Stable expression; pGIPZ vector.

MeSH terms

  • Animals
  • Carrier Proteins / genetics*
  • Cell Line, Tumor
  • HCT116 Cells
  • HeLa Cells
  • Hep G2 Cells
  • Humans
  • Isoenzymes / genetics
  • L-Lactate Dehydrogenase / genetics*
  • Male
  • Membrane Proteins / genetics*
  • Mice
  • Phosphorylation
  • Plasmids / genetics*
  • Point Mutation*
  • Protein Processing, Post-Translational
  • RNA Interference
  • RNA, Small Interfering / pharmacology*
  • Serine / metabolism
  • Thyroid Hormone-Binding Proteins
  • Thyroid Hormones / genetics*

Substances

  • Carrier Proteins
  • Isoenzymes
  • Membrane Proteins
  • RNA, Small Interfering
  • Thyroid Hormones
  • Serine
  • L-Lactate Dehydrogenase
  • lactate dehydrogenase 1