Nanopore sensors for viral particle quantification: current progress and future prospects

Bioengineered. 2021 Dec;12(2):9189-9215. doi: 10.1080/21655979.2021.1995991.

Abstract

Rapid, inexpensive, and laboratory-free diagnostic of viral pathogens is highly critical in controlling viral pandemics. In recent years, nanopore-based sensors have been employed to detect, identify, and classify virus particles. By tracing ionic current containing target molecules across nano-scale pores, nanopore sensors can recognize the target molecules at the single-molecule level. In the case of viruses, they enable discrimination of individual viruses and obtaining important information on the physical and chemical properties of viral particles. Despite classical benchtop virus detection methods, such as amplification techniques (e.g., PCR) or immunological assays (e.g., ELISA), that are mainly laboratory-based, expensive and time-consuming, nanopore-based sensing methods can enable low-cost and real-time point-of-care (PoC) and point-of-need (PoN) monitoring of target viruses. This review discusses the limitations of classical virus detection methods in PoN virus monitoring and then provides a comprehensive overview of nanopore sensing technology and its emerging applications in quantifying virus particles and classifying virus sub-types. Afterward, it discusses the recent progress in the field of nanopore sensing, including integrating nanopore sensors with microfabrication technology, microfluidics and artificial intelligence, which have been demonstrated to be promising in developing the next generation of low-cost and portable biosensors for the sensitive recognition of viruses and emerging pathogens.

Keywords: Nanopore sensor; artificial intelligence; biosensors; microfluidics; resistive pulse sensing; virus classification; virus detection.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Biosensing Techniques*
  • Machine Learning
  • Microfluidics
  • Nanopores*
  • Virion / isolation & purification*

Grants and funding

This work was supported by MITACS[IT21122 and IT27130] and Natural Sciences and Engineering Research Council of Canada [ALLRP 554653 - 20].