[Identification of geographical origins of Cordyceps based on data of amino acids with self-organizing map neural network]

Zhongguo Zhong Yao Za Zhi. 2021 Sep;46(18):4765-4773. doi: 10.19540/j.cnki.cjcmm.20210623.203.
[Article in Chinese]

Abstract

In this study, data of amino acids of Cordyceps samples from Qinghai and Tibet was analyzed with self-organizing map neural network. A model of XY-Fused network was established with the content of 8 major amino acids and total amino acids for the identification of geographical origins of Cordyceps from Qinghai and Tibet. It had the prediction accuracy of 83.3% for the test set. In addition, data mining indicated that methionine was a special kind of amino acid in Cordyceps which could serve as a marker to identify its geographical origins. On this basis, the content ratio of methionine to total amino acids was proposed to be a quantifiable indicator to distinguish Cordyceps from Qinghai and Tibet.

Keywords: Cordyceps; XY-Fused network; amino acid; methionine; self-organizing map neural network.

MeSH terms

  • Amino Acids
  • Cordyceps* / genetics
  • Geography
  • Neural Networks, Computer
  • Tibet

Substances

  • Amino Acids