Association of the SNP rs112369934 near TRIM66 Gene with POAG Endophenotypes in African Americans

Genes (Basel). 2021 Sep 15;12(9):1420. doi: 10.3390/genes12091420.

Abstract

We investigated the association of the single nucleotide polymorphism (SNP) rs112369934 near the TRIM66 gene with qualitative and quantitative phenotypes of primary open-angle glaucoma (POAG) in African Americans (AA). AA subjects over 35 years old were recruited for the Primary Open-Angle African American Glaucoma Genetics (POAAGG) study in Philadelphia, PA. Glaucoma cases were evaluated for phenotypes associated with POAG pathogenesis, and the associations between rs112369934 and phenotypes were investigated by logistic regression analysis and in gender-stratified case cohorts: The SNP rs112369934 was found to have a suggestive association with retinal nerve fiber layer (RNFL) thickness and cup-to-disc ratio (CDR) in 1087 male AA POAG cases, individuals with the TC genotype having thinner RNFL (95% CI 0.85 to 6.61, p = 0.01) and larger CDR (95% CI -0.07 to -0.01, p = 0.02) than those with wildtype TT. No other significant associations were found. In conclusion SNP rs112369934 may play a role in POAG pathogenesis in male AA individuals. However, this SNP has been implicated in higher POAG risk in both male and female AA POAG cases.

Keywords: African Americans; TRIM66; cup-to-disc ratio; genetic diseases; glaucoma; primary open-angle glaucoma; retinal nerve fiber layer.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Black or African American* / genetics
  • Black or African American* / statistics & numerical data
  • Endophenotypes
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Glaucoma, Open-Angle / ethnology
  • Glaucoma, Open-Angle / genetics*
  • Humans
  • Intracellular Signaling Peptides and Proteins / genetics*
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • United States / epidemiology

Substances

  • Intracellular Signaling Peptides and Proteins
  • TRIM66 protein, human