Complete genome sequence and virulence characterization of a neonatal meningitis Escherichia coli isolate

Microb Pathog. 2021 Nov:160:105199. doi: 10.1016/j.micpath.2021.105199. Epub 2021 Sep 22.

Abstract

Neonatal bacterial meningitis is a life-threatening disease in newborns, and neonatal meningitis Escherichia coli (NMEC) is the second most frequent bacteria causing this disease worldwide. In order to further understand the characteristics of this pathogen, an E. coli isolate W224 N from newborns with meningitis was sequenced for detailed genetic characterization and the virulence was tested by a series of phenotypic experiments. W224 N has a circular chromosome and three plasmids. It belongs to ST95 and the serotype is O18:H7. Comparative genomic analysis showed that W224 N was closely related to E. coli neonatal meningitis isolates RS218 and NMEC O18. There are 11 genomic islands in W224 N and most of the GIs are specific to W224 N. W224 N has most of the virulence factors other neonatal meningitis isolates have. The virulence genes located both on the genome and plasmid. At the same time, we found a virulence factor cdiA only present in W224 N but absent in the other five genomes analyzed. In vitro experiment showed that W224 N has strong serum resistance ability, low biofilm formation ability and high flagellar motility. It also has a very strong toxicity to mice and amoeba. The whole genome as well as in vitro and in vivo experiments showed that W224 N is a high virulent strain. The results can help us better learn about the pathogenicity of neonatal meningitis E. coli.

Keywords: Biofilm formation; Flagellar motility; Neonatal meningitis Escherichia coli (NMEC); Serum resistance; Virulence factors; Whole genome sequencing.

MeSH terms

  • Animals
  • Escherichia coli / genetics*
  • Escherichia coli / pathogenicity
  • Escherichia coli Proteins*
  • Genome, Bacterial*
  • Membrane Proteins
  • Meningitis, Escherichia coli* / microbiology
  • Mice
  • Virulence
  • Virulence Factors / genetics

Substances

  • CdiA protein, E coli
  • Escherichia coli Proteins
  • Membrane Proteins
  • Virulence Factors