Comprehensive analysis of the transcriptional expressions and prognostic value of S100A family in pancreatic ductal adenocarcinoma

BMC Cancer. 2021 Sep 16;21(1):1039. doi: 10.1186/s12885-021-08769-6.

Abstract

Background: Pancreatic ductal adenocarcinoma (PDAC) remains a treatment-refractory malignancy with poor prognosis. It is urgent to identify novel and valid biomarkers to predict the progress and prognosis of PDAC. The S100A family have been identified as being involved in cell proliferation, migration and differentiation progression of various cancer types. However, the expression patterns and prognostic values of S100As in PDAC remain to be analyzed.

Methods: We investigated the transcriptional expressions, methylation level and prognostic value of S100As in PDAC patients from the Oncomine, GEPIA2, Linkedomics and cBioPortal databases. Real-time PCR was used to detect the expressions of S100A2/4/6/10/14/16 in four pancreatic cancer cell lines and pancreatic cancer tissues from PDAC patients undergoing surgery. To verify the results further, immunohistochemistry was used to measure the expression of S100A2/4/6/10/14/16 in 43 PDAC patients' tissue samples. The drug relations of S100As were analyzed by using the Drugbank database.

Results: The results suggested that, the expression levels of S100A2/4/6/10/14/16 were elevated to PDAC tissues than in normal pancreatic tissues, and the promoter methylation levels of S100A S100A2/4/6/10/14/16 in PDAC (n = 10) were lower compared with normal tissue (n = 184) (P < 0.05). In addition, their expressions were negatively correlated with PDAC patient survival.

Conclusions: Taken together, these results suggest that S100A2/4/6/10/14/16 might be served as prognostic biomarkers for survivals of PDAC patients.

Keywords: Bioinformatics; Biomarkers; Pancreatic ductal adenocarcinoma; Prognosis; S100A.

MeSH terms

  • Adenocarcinoma / metabolism*
  • Adenocarcinoma / mortality
  • Annexin A2 / metabolism
  • Biomarkers, Tumor / metabolism*
  • Calcium-Binding Proteins / metabolism
  • Carcinoma, Pancreatic Ductal / metabolism*
  • Carcinoma, Pancreatic Ductal / mortality
  • Cell Cycle Proteins / metabolism
  • Cell Line, Tumor
  • Chemotactic Factors / metabolism
  • Databases, Genetic
  • Disease Progression
  • Humans
  • Pancreas / metabolism
  • Pancreatic Neoplasms / metabolism*
  • Pancreatic Neoplasms / mortality
  • Prognosis
  • RNA, Messenger / metabolism
  • S100 Calcium Binding Protein A6 / metabolism
  • S100 Calcium-Binding Protein A4 / metabolism
  • S100 Proteins / genetics
  • S100 Proteins / metabolism*
  • Transcription, Genetic

Substances

  • Annexin A2
  • Biomarkers, Tumor
  • Calcium-Binding Proteins
  • Cell Cycle Proteins
  • Chemotactic Factors
  • RNA, Messenger
  • S100 Calcium Binding Protein A6
  • S100 Calcium-Binding Protein A4
  • S100 Proteins
  • S100 calcium binding protein A10
  • S100A14 protein, human
  • S100A16 protein, human
  • S100A2 protein, human
  • S100A6 protein, human
  • S100A4 protein, human