Anaerobic 3-methylhopanoid production by an acidophilic photosynthetic purple bacterium

Arch Microbiol. 2021 Dec;203(10):6041-6052. doi: 10.1007/s00203-021-02561-7. Epub 2021 Sep 16.

Abstract

Bacterial lipids are well-preserved in ancient rocks and certain ones have been used as indicators of specific bacterial metabolisms or environmental conditions existing at the time of rock deposition. Here we show that an anaerobic bacterium produces 3-methylhopanoids, pentacyclic lipids previously detected only in aerobic bacteria and widely used as biomarkers for methane-oxidizing bacteria. Both Rhodopila globiformis, a phototrophic purple nonsulfur bacterium isolated from an acidic warm spring in Yellowstone, and a newly isolated Rhodopila species from a geochemically similar spring in Lassen Volcanic National Park (USA), synthesized 3-methylhopanoids and a suite of related hopanoids and contained the genes encoding the necessary biosynthetic enzymes. Our results show that 3-methylhopanoids can be produced under anoxic conditions and challenges the use of 3-methylhopanoids as biomarkers of oxic conditions in ancient rocks and as prima facie evidence that methanotrophic bacteria were active when the rocks were deposited.

Keywords: Anoxygenic phototrophs; Hopanoids; Rhodopila globiformis; Warm thermal springs.

MeSH terms

  • Acetobacteraceae*
  • Anaerobiosis
  • Base Composition
  • Phylogeny
  • RNA, Ribosomal, 16S
  • Sequence Analysis, DNA

Substances

  • RNA, Ribosomal, 16S

Supplementary concepts

  • Rhodopila globiformis