Machine learning-based real-time object locator/evaluator for cryo-EM data collection

Commun Biol. 2021 Sep 7;4(1):1044. doi: 10.1038/s42003-021-02577-1.

Abstract

In cryo-electron microscopy (cryo-EM) data collection, locating a target object is error-prone. Here, we present a machine learning-based approach with a real-time object locator named yoneoLocr using YOLO, a well-known object detection system. Implementation shows its effectiveness in rapidly and precisely locating carbon holes in single particle cryo-EM and in locating crystals and evaluating electron diffraction (ED) patterns in automated cryo-electron crystallography (cryo-EX) data collection. The proposed approach will advance high-throughput and accurate data collection of images and diffraction patterns with minimal human operation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Cryoelectron Microscopy / instrumentation
  • Cryoelectron Microscopy / methods*
  • Crystallography, X-Ray / instrumentation*
  • Data Collection / instrumentation*
  • Image Processing, Computer-Assisted / instrumentation
  • Image Processing, Computer-Assisted / methods*
  • Machine Learning*