Macrocyclic Tetramers-Structural Investigation of Peptide-Peptoid Hybrids

Molecules. 2021 Jul 28;26(15):4548. doi: 10.3390/molecules26154548.

Abstract

Outstanding affinity and specificity are the main characteristics of peptides, rendering them interesting compounds for basic and medicinal research. However, their biological applicability is limited due to fast proteolytic degradation. The use of mimetic peptoids overcomes this disadvantage, though they lack stereochemical information at the α-carbon. Hybrids composed of amino acids and peptoid monomers combine the unique properties of both parent classes. Rigidification of the backbone increases the affinity towards various targets. However, only little is known about the spatial structure of such constrained hybrids. The determination of the three-dimensional structure is a key step for the identification of new targets as well as the rational design of bioactive compounds. Herein, we report the synthesis and the structural elucidation of novel tetrameric macrocycles. Measurements were taken in solid and solution states with the help of X-ray scattering and NMR spectroscopy. The investigations made will help to find diverse applications for this new, promising compound class.

Keywords: macrocycles; multiconformational equilibrium; peptidomimetics; peptoids; spatial structure; tetramers.

MeSH terms

  • Amino Acids / chemistry*
  • Chemistry, Pharmaceutical / methods
  • Crystallography, X-Ray
  • Drug Design
  • Humans
  • Macrocyclic Compounds / chemical synthesis
  • Macrocyclic Compounds / chemistry*
  • Models, Chemical
  • Peptides / chemical synthesis
  • Peptides / chemistry*
  • Peptidomimetics / chemical synthesis
  • Peptidomimetics / chemistry*
  • Peptoids / chemical synthesis
  • Peptoids / chemistry*
  • Protein Stability

Substances

  • Amino Acids
  • Macrocyclic Compounds
  • Peptides
  • Peptidomimetics
  • Peptoids