Induction of Λ-helicity in a zinc complex with an alanine-appended aminopyridine ligand

Acta Crystallogr C Struct Chem. 2021 Aug 1;77(Pt 8):449-457. doi: 10.1107/S2053229621006471. Epub 2021 Jul 5.

Abstract

The crystal structure of tris[dimethyl 5-({1-[(pyridin-2-yl-κN)carbamoyl-κO]ethyl}carbamoyl)benzene-1,3-dicarboxylate]zinc(II) dinitrate acetonitrile trisolvate, [Zn(C19H19N3O6)3](NO3)2·3CH3CN or [Zn(L)3](NO3)2·3CH3CN, (1), has been determined by single-crystal X-ray diffraction. The neutral ligand L coordinates to the Zn2+ cation in a bidentate fashion via the pyridine N atom and an amide O atom, forming a six-membered chelate ring. The Λ-helical chirality of the Zn2+ coordination sphere is induced by pendant L-alanine residues through stacking interactions between the arene groups of two coordinated ligands, assisted by a hydrogen bond between amide groups bonded to the stacked arene rings. The third ligand is coordinated to the Zn2+ cation by the same six-membered chelate ring, but in the opposite direction with respect to the analogous chelate rings of the first two coordinated ligands. Besides ionic interactions between [ZnL3]2+ complexes and NO3- anions, several types of hydrogen bonds and intermolecular stacking interactions contribute to the stability of the solid-state phase.

Keywords: alanine; amino acid; aminopyridine; crystal structure; supramolecular chirality; zinc complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine / chemistry*
  • Amides / chemistry*
  • Aminopyridines
  • Anions / chemistry
  • Cations / chemistry
  • Coordination Complexes / chemistry*
  • Crystallography, X-Ray
  • Hydrogen Bonding
  • Ligands
  • Molecular Structure
  • Zinc / chemistry*

Substances

  • Amides
  • Aminopyridines
  • Anions
  • Cations
  • Coordination Complexes
  • Ligands
  • Zinc
  • Alanine