Structural basis for genome packaging, retention, and ejection in human cytomegalovirus

Nat Commun. 2021 Jul 27;12(1):4538. doi: 10.1038/s41467-021-24820-3.

Abstract

How the human cytomegalovirus (HCMV) genome-the largest among human herpesviruses-is packaged, retained, and ejected remains unclear. We present the in situ structures of the symmetry-mismatched portal and the capsid vertex-specific components (CVSCs) of HCMV. The 5-fold symmetric 10-helix anchor-uncommon among known portals-contacts the portal-encircling DNA, which is presumed to squeeze the portal as the genome packaging proceeds. We surmise that the 10-helix anchor dampens this action to delay the portal reaching a "head-full" packaging state, thus facilitating the large genome to be packaged. The 6-fold symmetric turret, latched via a coiled coil to a helix from a major capsid protein, supports the portal to retain the packaged genome. CVSCs at the penton vertices-presumed to increase inner capsid pressure-display a low stoichiometry, which would aid genome retention. We also demonstrate that the portal and capsid undergo conformational changes to facilitate genome ejection after viral cell entry.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid / chemistry
  • Capsid / ultrastructure
  • Capsid Proteins / metabolism
  • Cell Line
  • Cytomegalovirus / chemistry*
  • Cytomegalovirus / genetics*
  • Cytomegalovirus / ultrastructure
  • DNA Packaging / genetics*
  • DNA, Viral / genetics
  • DNA, Viral / ultrastructure
  • Genome, Viral*
  • Humans
  • Models, Molecular
  • Structural Homology, Protein
  • Virion / chemistry
  • Virion / ultrastructure

Substances

  • Capsid Proteins
  • DNA, Viral