Percolation Theory Reveals Biophysical Properties of Virus-like Particles

ACS Nano. 2021 Aug 24;15(8):12988-12995. doi: 10.1021/acsnano.1c01882. Epub 2021 Jul 23.

Abstract

The viral protein containers that encapsulate a virus' genetic material are repurposed as virus-like particles in a host of nanotechnology applications, including cargo delivery, storage, catalysis, and vaccination. These viral architectures have evolved to sit on the knife's edge between stability, to provide adequate protection for their genetic cargoes, and instability, to enable their efficient and timely release in the host cell environment upon environmental cues. By introducing a percolation theory for viral capsids, we demonstrate that the geometric characteristics of a viral capsid in terms of its subunit layout and intersubunit interaction network are key for its disassembly behavior. A comparative analysis of all alternative homogeneously tiled capsid structures of the same stoichiometry identifies evolutionary drivers favoring specific viral geometries in nature and offers a guide for virus-like particle design in nanotechnology.

Keywords: generalized quasi-equivalence principle; percolation theory; virus disassembly; virus nanotechnology; virus-like particle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid Proteins / chemistry
  • Capsid* / chemistry
  • Viral Proteins / analysis
  • Virion / metabolism
  • Viruses* / chemistry
  • Viruses* / genetics

Substances

  • Capsid Proteins
  • Viral Proteins