Engineering self-organized criticality in living cells

Nat Commun. 2021 Jul 20;12(1):4415. doi: 10.1038/s41467-021-24695-4.

Abstract

Complex dynamical fluctuations, from intracellular noise, brain dynamics or computer traffic display bursting dynamics consistent with a critical state between order and disorder. Living close to the critical point has adaptive advantages and it has been conjectured that evolution could select these critical states. Is this the case of living cells? A system can poise itself close to the critical point by means of the so-called self-organized criticality (SOC). In this paper we present an engineered gene network displaying SOC behaviour. This is achieved by exploiting the saturation of the proteolytic degradation machinery in E. coli cells by means of a negative feedback loop that reduces congestion. Our critical motif is built from a two-gene circuit, where SOC can be successfully implemented. The potential implications for both cellular dynamics and behaviour are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Engineering / methods*
  • Escherichia coli / genetics
  • Escherichia coli / growth & development*
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Feedback, Physiological
  • Gene Expression Regulation, Bacterial*
  • Genetic Engineering*
  • Models, Genetic
  • Proteolysis
  • Single-Cell Analysis

Substances

  • Escherichia coli Proteins