Single-Cell Analysis Reveals the Heterogeneity of Monocyte-Derived and Peripheral Type-2 Conventional Dendritic Cells

J Immunol. 2021 Aug 1;207(3):837-848. doi: 10.4049/jimmunol.2100094. Epub 2021 Jul 19.

Abstract

Dendritic cells (DCs) are critical for pathogen recognition and Ag processing/presentation. Human monocyte-derived DCs (moDCs) have been extensively used in experimental studies and DC-based immunotherapy approaches. However, the extent of human moDC and peripheral DCs heterogeneity and their interrelationship remain elusive. In this study, we performed single-cell RNA sequencing of human moDCs and blood DCs. We identified seven subtypes within moDCs: five corresponded to type 2 conventional DCs (cDC2s), and the other two were CLEC10A+CD127+ cells with no resemblance to any peripheral DC subpopulations characterized to date. Moreover, we defined five similar subtypes in human cDC2s, revealed the potential differentiation trajectory among them, and unveiled the transcriptomic differences between moDCs and cDC2s. We further studied the transcriptomic changes of each moDC subtype during maturation, demonstrating SLAMF7 and IL15RA as maturation markers and CLEC10A and SIGLEC10 as markers for immature DCs. These findings will enable more accurate functional/developmental analyses of human cDC2s and moDCs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Cell Differentiation / genetics
  • Cells, Cultured
  • Cytokines / metabolism
  • Dendritic Cells / physiology*
  • Female
  • Gene Expression Profiling
  • Humans
  • Lectins / genetics
  • Lectins, C-Type / genetics
  • Male
  • Monocytes / physiology*
  • Receptors, Cell Surface / genetics
  • Receptors, Interleukin-15 / genetics
  • Sequence Analysis, RNA
  • Signaling Lymphocytic Activation Molecule Family / genetics
  • Single-Cell Analysis / methods*
  • Th2 Cells / immunology
  • Young Adult

Substances

  • CLEC10A protein, human
  • Cytokines
  • IL15RA protein, human
  • Lectins
  • Lectins, C-Type
  • Receptors, Cell Surface
  • Receptors, Interleukin-15
  • SIGLEC10 protein, human
  • SLAMF7 protein, human
  • Signaling Lymphocytic Activation Molecule Family