Structural basis for chemokine recognition and receptor activation of chemokine receptor CCR5

Nat Commun. 2021 Jul 6;12(1):4151. doi: 10.1038/s41467-021-24438-5.

Abstract

The chemokine receptor CCR5 plays a vital role in immune surveillance and inflammation. However, molecular details that govern its endogenous chemokine recognition and receptor activation remain elusive. Here we report three cryo-electron microscopy structures of Gi1 protein-coupled CCR5 in a ligand-free state and in complex with the chemokine MIP-1α or RANTES, as well as the crystal structure of MIP-1α-bound CCR5. These structures reveal distinct binding modes of the two chemokines and a specific accommodate pattern of the chemokine for the distal N terminus of CCR5. Together with functional data, the structures demonstrate that chemokine-induced rearrangement of toggle switch and plasticity of the receptor extracellular region are critical for receptor activation, while a conserved tryptophan residue in helix II acts as a trigger of receptor constitutive activation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Chemokine CCL3 / metabolism
  • Chemokine CCL5 / chemistry
  • Chemokine CCL5 / metabolism
  • Chemokines / chemistry*
  • Chemokines / metabolism*
  • Cryoelectron Microscopy
  • Ligands
  • Models, Molecular
  • Protein Conformation
  • Receptors, CCR5 / chemistry*
  • Receptors, CCR5 / genetics
  • Receptors, CCR5 / metabolism*

Substances

  • CCL5 protein, human
  • CCR5 protein, human
  • Chemokine CCL3
  • Chemokine CCL5
  • Chemokines
  • Ligands
  • Receptors, CCR5