A versatile toolbox for investigating biological processes based on quinone methide chemistry: From self-immolative linkers to self-immobilizing agents

Bioorg Med Chem. 2021 Aug 15:44:116281. doi: 10.1016/j.bmc.2021.116281. Epub 2021 Jun 18.

Abstract

Quinone methide (QM) species have been included in the design of various functional molecules. In this review, we present a comprehensive overview of bioanalytical tools based on QM chemistry. In the first part, we focus on self-immolative linkers that have been incorporated into functional molecules such as prodrugs and fluorescent probes. In the latter half, we outline how the highly electrophilic property of QMs, enabling them to react rapidly with neighboring nucleophiles, has been applied to develop inhibitors or labeling probes for enzymes, as well as self-immobilizing fluorogenic probes with high spatial resolution. This review systematically summarizes the versatile QM toolbox available for investigating biological processes.

Keywords: Cis or trans-labeling; Quinone methide chemistry; Self-immobilization; Self-immolative linker.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Alkaline Phosphatase / antagonists & inhibitors*
  • Alkaline Phosphatase / metabolism
  • Animals
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology*
  • Fluorescent Dyes / chemical synthesis
  • Fluorescent Dyes / chemistry
  • Fluorescent Dyes / pharmacology*
  • Humans
  • Indolequinones / chemical synthesis
  • Indolequinones / chemistry
  • Indolequinones / pharmacology*
  • Molecular Structure
  • beta-Galactosidase / antagonists & inhibitors*
  • beta-Galactosidase / metabolism

Substances

  • Enzyme Inhibitors
  • Fluorescent Dyes
  • Indolequinones
  • quinone methide
  • Alkaline Phosphatase
  • beta-Galactosidase