Characteristics of circular RNAs expression of peripheral blood mononuclear cells in humans with coronary artery disease

Physiol Genomics. 2021 Aug 1;53(8):349-357. doi: 10.1152/physiolgenomics.00020.2021. Epub 2021 Jun 14.

Abstract

Circular RNAs (circRNAs) function as promising biomarkers and therapeutic targets for coronary artery disease due to their high stability, covalently closed structure, and potential gene regulation. We aimed to identify the expression profile and role of circular RNAs (circRNAs) in coronary artery disease (CAD). We performed RNA sequence analysis of circRNAs in peripheral blood mononuclear cells of five patients with CAD and five controls. Bioinformatics analyses were adopted to explore biological functions of differentially expressed circRNAs. The miRanda and TargetScan tools were used to predict the microRNA (miRNA)-targeting interactions and to construct a triple network of differentially expressed gene-circRNA-miRNA-mRNA. In total, 13,160 downregulated and 12,905 upregulated circRNAs were identified in CAD. A gene ontology annotation analysis showed that genes in the network were involved in organelle organization, cell cycle, mitotic cycle, and cellular metabolic process. Parental genes of the 10 dysregulated circRNAs were involved in metabolism and protein modification, and these circRNAs might regulate gene expression associated with CAD via miRNA sponges. As potential competing endogenous RNAs (ceRNAs), dysregulated circRNAs may be involved in the pathogenesis of CAD, which provides new insights into the diagnosis and prognosis of coronary artery disease.

Keywords: RNA sequencing; atherosclerosis; circular RNA; coronary artery disease; peripheral blood mononuclear cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Case-Control Studies
  • Coronary Artery Disease / blood*
  • Coronary Artery Disease / genetics*
  • Female
  • Gene Expression
  • Gene Ontology
  • Gene Regulatory Networks
  • Humans
  • Leukocytes, Mononuclear / physiology*
  • Male
  • MicroRNAs / genetics
  • Middle Aged
  • RNA, Circular / blood*
  • RNA, Circular / genetics
  • RNA, Messenger / genetics
  • Sequence Analysis, RNA

Substances

  • MicroRNAs
  • RNA, Circular
  • RNA, Messenger