Applications of single-cell sequencing in cancer research: progress and perspectives

J Hematol Oncol. 2021 Jun 9;14(1):91. doi: 10.1186/s13045-021-01105-2.

Abstract

Single-cell sequencing, including genomics, transcriptomics, epigenomics, proteomics and metabolomics sequencing, is a powerful tool to decipher the cellular and molecular landscape at a single-cell resolution, unlike bulk sequencing, which provides averaged data. The use of single-cell sequencing in cancer research has revolutionized our understanding of the biological characteristics and dynamics within cancer lesions. In this review, we summarize emerging single-cell sequencing technologies and recent cancer research progress obtained by single-cell sequencing, including information related to the landscapes of malignant cells and immune cells, tumor heterogeneity, circulating tumor cells and the underlying mechanisms of tumor biological behaviors. Overall, the prospects of single-cell sequencing in facilitating diagnosis, targeted therapy and prognostic prediction among a spectrum of tumors are bright. In the near future, advances in single-cell sequencing will undoubtedly improve our understanding of the biological characteristics of tumors and highlight potential precise therapeutic targets for patients.

Keywords: Circulating tumor cells; Heterogeneity; Microenvironment; Single-cell sequencing.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Epigenesis, Genetic
  • Gene Expression Profiling / methods
  • Genomics / methods*
  • Humans
  • Neoplasms / genetics*
  • Neoplasms / pathology
  • Neoplastic Cells, Circulating / metabolism
  • Neoplastic Cells, Circulating / pathology
  • Sequence Analysis, DNA / methods
  • Sequence Analysis, RNA / methods
  • Single-Cell Analysis / methods*
  • Transcriptome