Screening Aptamers that Are Specific for Beclomethasone and the Development of Quantum Dot-Based Assay

Appl Biochem Biotechnol. 2021 Oct;193(10):3139-3150. doi: 10.1007/s12010-021-03585-x. Epub 2021 Jun 3.

Abstract

We developed an aptamer that was specific for beclomethasone (BEC) via systematic evolution of ligands by exponential enrichment (SELEX). Development was monitored by real-time quantitative PCR (Q-PCR) and the enriched library was sequenced by high-throughput sequencing. Forty-seven aptamer candidates were obtained; of these, BEC-6 showed the highest affinity (Kd = 0.15 ± 0.02 μM) and did not cross-react with other BEC analogs. We also developed a quantum dot-based assay (QDA) for the detection of BEC that was based upon a quantum dot (QD) composite probe. Under optimized reaction conditions, the linear range of this method for BEC was 0.1 to 10 μM with a low detection limit (LOD) of 0.1 μM. Subsequently, the method was used to detect BEC in Traditional Chinese Medicine (TCM) with a mean recovery of 81.72-91.84%. This is the first report to describe the development of an aptamer against BEC; BEC-6 can also be engineered into QDA for the detection of BEC.

Keywords: Aptamers; Beclomethasone; Quantum dot-based assay; SELEX; Systematic evolution of ligands by exponential enrichment.

MeSH terms

  • Beclomethasone*
  • Quantum Dots
  • SELEX Aptamer Technique

Substances

  • Beclomethasone