A new KSRP-binding compound suppresses distant metastasis of colorectal cancer by targeting the oncogenic KITENIN complex

Mol Cancer. 2021 May 26;20(1):78. doi: 10.1186/s12943-021-01368-w.

Abstract

Background: Distant metastasis is the major cause of death in patients with colorectal cancer (CRC). Previously, we identified KITENIN as a metastasis-enhancing gene and suggested that the oncogenic KITENIN complex is involved in metastatic dissemination of KITENIN-overexpressing CRC cells. Here, we attempted to find substances targeting the KITENIN complex and test their ability to suppress distant metastasis of CRC.

Methods: We screened a small-molecule compound library to find candidate substances suppressing the KITENIN complex in CRC cells. We selected a candidate compound and examined its effects on the KITENIN complex and distant metastasis through in vitro assays, a molecular docking model, and in vivo tumor models.

Results: Among several compounds, we identified DKC1125 (Disintegrator of KITENIN Complex #1125) as the best candidate. DKC1125 specifically suppressed KITENIN gain of function. After binding KH-type splicing regulatory protein (KSRP), DKC1125 degraded KITENIN and Dvl2 by recruiting RACK1 and miRNA-124, leading to the disintegration of the functional KITENIN-KSRP-RACK1-Dvl2 complex. A computer docking model suggested that DKC1125 specifically interacted with the binding pocket of the fourth KH-domain of KSRP. KITENIN-overexpressing CRC cells deregulated certain microRNAs and were resistant to 5-fluorouracil, oxaliplatin, and cetuximab. DKC1125 restored sensitivity to these drugs by normalizing expression of the deregulated microRNAs, including miRNA-124. DKC1125 effectively suppressed colorectal liver metastasis in a mouse model. Interestingly, the combination of DKC1125 with 5-fluorouracil suppressed metastasis more effectively than either drug alone.

Conclusion: DKC1125 targets the KITENIN complex and could therefore be used as a novel therapeutic to suppress liver metastasis in CRC expressing high levels of KITENIN.

Keywords: Colorectal cancer; KITENIN complex; KSRP; Metastasis; microRNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology*
  • Carrier Proteins / drug effects*
  • Colorectal Neoplasms / pathology*
  • Drug Discovery
  • Humans
  • Membrane Proteins / drug effects*
  • Mice
  • Molecular Docking Simulation
  • Neoplasm Metastasis / pathology
  • RNA-Binding Proteins / antagonists & inhibitors
  • RNA-Binding Proteins / drug effects*
  • RNA-Binding Proteins / metabolism*
  • Trans-Activators / antagonists & inhibitors
  • Trans-Activators / drug effects*
  • Trans-Activators / metabolism*

Substances

  • Antineoplastic Agents
  • Carrier Proteins
  • KHSRP protein, human
  • Khsrp protein, mouse
  • Membrane Proteins
  • RNA-Binding Proteins
  • Trans-Activators
  • VANGL1 protein, human
  • Vangl1 protein, mouse