The first in-depth exploration of the genome of the engineered bacterium, Gluconobacter thailandicus

Biotechnol Appl Biochem. 2022 Jun;69(3):1190-1198. doi: 10.1002/bab.2195. Epub 2021 May 31.

Abstract

Glycerol is an abundant byproduct of biodiesel production that has significant industrial value and can be converted into dihydroxyacetone (DHA). DHA is widely used for the production of various chemicals, pharmaceuticals, and food additives. Gluconobacter can convert glycerol to DHA through two different pathways, including membrane-bound dehydrogenases with pyrroloquinoline quinone (PQQ) and NAD(P)+ -dependent enzymes. Previous work has indicated that membrane-bound dehydrogenases are present in Gluconobacter oxydans and Gluconobacter frateurii, but the metabolic mechanism of Gluconobacter thailandicus's glycerol conversion is still not clear. Through in-depth analysis of the G. thailandicus genome and annotation of its metabolic pathways, we revealed the existence of both PQQ and NAD(P)+ -dependent enzymes in G. thailandicus. In addition, this study provides important information related to the tricarboxylic acid cycle, glycerol dehydrogenase level, and phylogenetic relationships of this important species.

Keywords: Gluconobacter thailandicus; PacBio RS II; dihydroxyacetone; enzyme; glycerol; pyrroloquinoline quinone.

MeSH terms

  • Citric Acid Cycle / genetics
  • Dihydroxyacetone / metabolism
  • Genetic Engineering
  • Genome, Bacterial* / genetics
  • Gluconobacter* / genetics
  • Gluconobacter* / metabolism
  • Glycerol* / metabolism
  • Microorganisms, Genetically-Modified* / genetics
  • Microorganisms, Genetically-Modified* / metabolism
  • NAD / metabolism
  • NADP / metabolism
  • PQQ Cofactor / metabolism
  • Phylogeny
  • Sugar Alcohol Dehydrogenases / analysis

Substances

  • NAD
  • NADP
  • PQQ Cofactor
  • Sugar Alcohol Dehydrogenases
  • glycerol dehydrogenase
  • Dihydroxyacetone
  • Glycerol

Supplementary concepts

  • Gluconobacter thailandicus