Spectroscopic and biochemical characterization of metallo-β-lactamase IMP-1 with dicarboxylic, sulfonyl, and thiol inhibitors

Bioorg Med Chem. 2021 Jun 15:40:116183. doi: 10.1016/j.bmc.2021.116183. Epub 2021 May 1.

Abstract

In an effort to probe the biophysical mechanisms of inhibition for ten previously-reported inhibitors of metallo-β-lactamases (MBL) with MBL IMP-1, equilibrium dialysis, metal analyses coupled with atomic absorption spectroscopy (AAS), native state mass spectrometry (native MS), and ultraviolet-visible spectrophotometry (UV-VIS) were used. 6-(1H-tetrazol-5-yl) picolinic acid (1T5PA), ANT431, D/l-captopril, thiorphan, and tiopronin were shown to form IMP-1/Zn(II)/inhibitor ternary complexes, while dipicolinic acid (DPA) and 4-(3-aminophenyl)pyridine-2,6-dicarboxylic acid (3AP-DPA) stripped some metal from the active site of IMP but also formed ternary complexes. DPA and 3AP-DPA stripped less metal from IMP-1 than from VIM-2 but stripped more metal from IMP-1 than from NDM-1. In contrast to a previous report, pterostilbene does not appear to bind to IMP-1 under our conditions. These results, along with previous studies, demonstrate similar mechanisms of inhibition toward different MBLs for different MBL inhibitors.

Keywords: Antibiotic resistance; IMP-1; MBL inhibitors; Metallo-β-lactamase; Native state mass spectrometry.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Dicarboxylic Acids / chemistry
  • Dicarboxylic Acids / pharmacology*
  • Dose-Response Relationship, Drug
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology*
  • Mass Spectrometry
  • Molecular Structure
  • Pseudomonas aeruginosa / enzymology
  • Serratia marcescens / enzymology
  • Spectrophotometry, Atomic
  • Spectrophotometry, Ultraviolet
  • Structure-Activity Relationship
  • Sulfhydryl Compounds / chemistry
  • Sulfhydryl Compounds / pharmacology*
  • Sulfides / chemistry
  • Sulfides / pharmacology*
  • beta-Lactamases / metabolism*

Substances

  • Dicarboxylic Acids
  • Enzyme Inhibitors
  • Sulfhydryl Compounds
  • Sulfides
  • beta-lactamase IMP-1
  • beta-Lactamases