Characterization of a gene cluster containing four genes relevant to biosynthesis of inner core of lipopolysaccharide in Cronobacter sakazakii

Biotechnol Appl Biochem. 2022 Jun;69(3):1080-1093. doi: 10.1002/bab.2179. Epub 2021 May 9.

Abstract

Many genes in the biosynthetic pathway of lipopolysaccharide in Cronobacter sakazakii have not been identified. In this study, we demonstrate that an operon containing four genes ESA_RS18945, ESA_RS18950, ESA_RS18955, and ESA_RS18960 is responsible for L-glycero-D-mannoheptose addition on the inner core of lipopolysaccharide in C. sakazakii. The proteins encoded by these four genes are homologous to E. coli WaaQ, WaaC, WaaF, and WaaD. Lipopolysaccharide from the deletion mutants of ESA_RS18945, ESA_RS18950, ESA_RS18955, and ESA_RS18960 (named as △RS18945, △RS18950, △RS18955 and △RS18960, respectively) were analyzed by SDS-PAGE. △RS18945 synthesized lipopolysaccharide with similar length to the wildtype BAA-894, whereas △RS18950, △RS18955, and △RS18960 synthesized much shorter lipopolysaccharide. This suggests that the enzyme encoded by ESA_RS18945 might function as E. coli WaaQ on the sidechain of lipopolysaccharide. When E. coli WaaC, WaaF, and WaaD were overexpressed in △RS18950, △RS18955, and △RS18960, respectively, the full length of lipopolysaccharide was recovered. Mass spectrometry analysis indicates that △RS18950 and △RS18960 only synthesized Kdo2 -lipid A, confirming that enzymes encoded by ESA_RS18950 and ESA_RS18960 have similar functions to E. coli WaaC and WaaD, respectively. Hep-Kdo2 -lipid A with a phosphoethanolamine was produced in △RS18955, suggesting that the enzyme encoded by ESA_RS18955 has similar function to E. coli WaaF.

Keywords: Kdo2-lipid A; LPS core; WaaC; WaaD; WaaF; antibiotic resistance; cronobacter sakazakii; lipopolysaccharide; outer membrane.

MeSH terms

  • Cronobacter sakazakii* / genetics
  • Cronobacter sakazakii* / metabolism
  • Escherichia coli / metabolism
  • Glycosyltransferases / metabolism
  • Lipid A / metabolism
  • Lipopolysaccharides* / biosynthesis
  • Lipopolysaccharides* / genetics
  • Multigene Family / genetics

Substances

  • Lipid A
  • Lipopolysaccharides
  • Glycosyltransferases