Stick-Based Methods for Aptamer-Mediated siRNA Targeted Delivery

Methods Mol Biol. 2021:2282:31-42. doi: 10.1007/978-1-0716-1298-9_3.

Abstract

Despite the therapeutic utility of small interfering RNA (siRNA) molecules, the development of a safe and reliable method to selectively target diseased organs and tissues is still a critical need for their translation to the clinic. Here we describe how nucleic acid-based aptamers against cell surface epitopes may be used to address this issue. We discuss the most recent examples and advances in the field of aptamer siRNA delivery and provide a fast and simple protocol for the design and generation of aptamer-siRNA chimeras. The described approach is based on the annealing of the targeting aptamer, and the antisense strand through "stick" complementary sequences elongated at their 3' end, and the subsequent paring with the sense strand. Such a protocol allows a modular non-covalent generation of the constructs and permits an efficient delivery of the siRNA moiety into aptamer target cells.

Keywords: Aptamers; Non-covalent constructs; Targeted delivery; Targeted therapy; siRNAs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aptamers, Nucleotide / genetics*
  • Aptamers, Nucleotide / metabolism
  • Brain Neoplasms / genetics
  • Brain Neoplasms / metabolism
  • Cell Line, Tumor
  • Gene Expression Regulation, Neoplastic
  • Gene Transfer Techniques*
  • Glioblastoma / genetics
  • Glioblastoma / metabolism
  • Humans
  • RNA Interference*
  • RNA, Small Interfering / genetics*
  • RNA, Small Interfering / metabolism
  • Receptor, Platelet-Derived Growth Factor beta / genetics
  • Receptor, Platelet-Derived Growth Factor beta / metabolism
  • Research Design
  • STAT3 Transcription Factor / genetics*
  • STAT3 Transcription Factor / metabolism
  • Workflow

Substances

  • Aptamers, Nucleotide
  • RNA, Small Interfering
  • STAT3 Transcription Factor
  • STAT3 protein, human
  • PDGFRB protein, human
  • Receptor, Platelet-Derived Growth Factor beta