Synthesis of a Coumarin-Based PPARγ Fluorescence Probe for Competitive Binding Assay

Int J Mol Sci. 2021 Apr 14;22(8):4034. doi: 10.3390/ijms22084034.

Abstract

Peroxisome proliferator-activated receptor γ (PPARγ) is a molecular target of metabolic syndrome and inflammatory disease. PPARγ is an important nuclear receptor and numerous PPARγ ligands were developed to date; thus, efficient assay methods are important. Here, we investigated the incorporation of 7-diethylamino coumarin into the PPARγ agonist rosiglitazone and used the compound in a binding assay for PPARγ. PPARγ-ligand-incorporated 7-methoxycoumarin, 1, showed weak fluorescence intensity in a previous report. We synthesized PPARγ-ligand-incorporating coumarin, 2, in this report, and it enhanced the fluorescence intensity. The PPARγ ligand 2 maintained the rosiglitazone activity. The obtained partial agonist 6 appeared to act through a novel mechanism. The fluorescence intensity of 2 and 6 increased by binding to the ligand binding domain (LBD) of PPARγ and the affinity of reported PPARγ ligands were evaluated using the probe.

Keywords: PPARγ ligand; coumarin; crystal structure; fluorescent ligand; screening.

MeSH terms

  • Animals
  • Binding, Competitive*
  • Biological Assay*
  • COS Cells
  • Chlorocebus aethiops
  • Coumarins / chemistry*
  • Crystallography, X-Ray
  • Fluorescent Dyes / chemical synthesis*
  • Fluorescent Dyes / chemistry
  • Humans
  • Hydrogen Bonding
  • Inhibitory Concentration 50
  • Ligands
  • PPAR gamma / agonists
  • PPAR gamma / metabolism*
  • Spectrometry, Fluorescence
  • Transcription, Genetic

Substances

  • Coumarins
  • Fluorescent Dyes
  • Ligands
  • PPAR gamma
  • coumarin