Full-length ORF2 sequence-based genetic and phylogenetic characterization of Korean feline caliciviruses

J Vet Sci. 2021 May;22(3):e32. doi: 10.4142/jvs.2021.22.e32. Epub 2021 Mar 18.

Abstract

Feline calicivirus (FCV) is a highly infectious pathogen in cats and widely distributed worldwide with high genetic variation. Full-length open reading frame 2 of 5 from recently isolated Korean FCV isolates were sequenced and compared with those of global isolates. The results of phylogenetic analysis supported dividing global FCV isolates into two genogroups (type I and II) and demonstrated the presence of genogroup II in Korea, indicating their geographic spread in East Asia. High sequence variations in region E of the FCV isolates emphasizes that a novel vaccine needs to be developed to induce protective immunity against various FCV strains.

Keywords: Feline calicivirus; genogroup; open reading frame 2; phylogenetic analysis.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Caliciviridae Infections / veterinary*
  • Caliciviridae Infections / virology
  • Calicivirus, Feline / genetics*
  • Capsid Proteins / analysis*
  • Cat Diseases / virology*
  • Cats
  • Phylogeny
  • Republic of Korea

Substances

  • Capsid Proteins

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