Chemoenzymatic synthesis of 2,6-disubstituted tetrahydropyrans with high σ1 receptor affinity, antitumor and analgesic activity

Eur J Med Chem. 2021 Jul 5:219:113443. doi: 10.1016/j.ejmech.2021.113443. Epub 2021 Apr 20.

Abstract

1,3-Dioxanes 1 and cyclohexanes 2 bearing a phenyl ring and an aminoethyl moiety in 1,3-relationship to each other represent highly potent σ1 receptor antagonists. In order to increase the chemical stability of the acetalic 1,3-dioxanes 1 and the polarity of the cyclohexanes 2, tetrahydropyran derivatives 3 equipped with the same substituents were designed, synthesized and pharmacologically evaluated. The key step of the synthesis was a lipase-catalyzed enantioselective acetylation of the alcohol (R)-5 leading finally to enantiomerically pure test compounds 3a-g. With respect to σ1 receptor affinity and selectivity over a broad range of related (σ2, PCP binding site) and further targets, the enantiomeric benzylamines 3a and cyclohexylmethylamines 3b represent the most promising drug candidates of this series. However, the eudismic ratio for σ1 binding is only in the range of 2.5-3.3. Classical molecular dynamics (MD) simulations confirmed the same binding pose for both the tetrahydropyran 3 and cyclohexane derivatives 2 at the σ1 receptor, according to which: i) the protonated amino moiety of (2S,6R)-3a engages the same key polar interactions with Glu172 (ionic) and Phe107 (π-cation), ii) the lipophilic parts of (2S,6R)-3a are hosted in three hydrophobic regions of the σ1 receptor, and iii) the O-atom of the tetrahydropyran derivatives 3 does not show a relevant interaction with the σ1 receptor. Further in silico evidences obtained by the application of free energy perturbation and steered MD techniques fully supported the experimentally observed difference in receptor/ligand affinities. Tetrahydropyrans 3 require a lower dissociative force peak than cyclohexane analogs 2. Enantiomeric benzylamines 3a and cyclohexylmethylamines 3b were able to inhibit the growth of the androgen negative human prostate cancer cell line DU145. The cyclohexylmethylamine (2S,6R)-3b showed the highest σ1 affinity (Ki1) = 0.95 nM) and the highest analgesic activity in vivo (67%).

Keywords: 2,6-Disubstituted tetrahydropyrans; Analgesic activity; Androgen negative human prostate cancer cell line DU145; Antiallodynic activity; Antitumor activity; CD spectroscopy; Chemoenzymatic synthesis; Chiral HPLC; Docking studies; Kinetic resolution; Molecular dynamics; Neuropathic pain; Selectivity; Steered molecular dynamics; Stereochemistry; Structure affinity relationships; σ(1) receptor; σ(1) receptor affinity.

MeSH terms

  • Analgesics / chemical synthesis*
  • Analgesics / metabolism
  • Analgesics / therapeutic use
  • Animals
  • Antineoplastic Agents / chemical synthesis*
  • Antineoplastic Agents / metabolism
  • Antineoplastic Agents / pharmacology
  • Binding Sites
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Disease Models, Animal
  • Female
  • Humans
  • Hyperalgesia / drug therapy
  • Ligands
  • Mice
  • Molecular Dynamics Simulation
  • Protein Binding
  • Pyrans / chemistry*
  • Pyrans / metabolism
  • Receptors, sigma / chemistry
  • Receptors, sigma / metabolism*
  • Sigma-1 Receptor
  • Stereoisomerism
  • Structure-Activity Relationship
  • Thermodynamics

Substances

  • Analgesics
  • Antineoplastic Agents
  • Ligands
  • Pyrans
  • Receptors, sigma