Transcription-Factor-based Biosensor Engineering for Applications in Synthetic Biology

ACS Synth Biol. 2021 May 21;10(5):911-922. doi: 10.1021/acssynbio.0c00252. Epub 2021 Apr 25.

Abstract

Transcription-factor-based biosensors (TFBs) are often used for metabolite detection, adaptive evolution, and metabolic flux control. However, designing TFBs with superior performance for applications in synthetic biology remains challenging. Specifically, natural TFBs often do not meet real-time detection requirements owing to their slow response times and inappropriate dynamic ranges, detection ranges, sensitivity, and selectivity. Furthermore, designing and optimizing complex dynamic regulation networks is time-consuming and labor-intensive. This Review highlights TFB-based applications and recent engineering strategies ranging from traditional trial-and-error approaches to novel computer-model-based rational design approaches. The limitations of the applications and these engineering strategies are additionally reviewed.

Keywords: adaptive evolution; dose−response; dynamic regulation; genetic circuits; high-throughput screening.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Biosensing Techniques / methods*
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Regulatory Networks
  • High-Throughput Screening Assays / methods
  • Humans
  • Ligands
  • Metabolic Engineering / methods*
  • Microorganisms, Genetically-Modified
  • Protein Binding
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Synthetic Biology / methods
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism*

Substances

  • Ligands
  • Transcription Factors