A SARS-CoV-2 -human metalloproteome interaction map

J Inorg Biochem. 2021 Jun:219:111423. doi: 10.1016/j.jinorgbio.2021.111423. Epub 2021 Mar 13.

Abstract

The recent pandemic caused by the novel coronavirus resulted in the greatest global health crisis since the Spanish flu pandemic of 1918. There is limited knowledge of whether SARS-CoV-2 is physically associated with human metalloproteins. Recently, high-confidence, experimentally supported protein-protein interactions between SARS-CoV-2 and human proteins were reported. In this work, 58 metalloproteins among these human targets have been identified by a structure-based approach. This study reveals that most human metalloproteins interact with the recently discovered SARS-CoV-2 orf8 protein, whose antibodies are one of the principal markers of SARS-CoV-2 infections. Furthermore, this work provides sufficient evidence to conclude that Zn2+ plays an important role in the interplay between the novel coronavirus and humans. First, the content of Zn-binding proteins in the involved human metalloproteome is significantly higher than that of the other metal ions. Second, a molecular linkage between the identified human Zn-binding proteome with underlying medical conditions, that might increase the risk of severe illness from the SARS-CoV-2 virus, has been found. Likely perturbations of host cellular metal homeostasis by SARS-CoV-2 infection are highlighted.

Keywords: Metal homeostasis; Metalloproteome; PPI; SARS-CoV-2; SARS-CoV-2 orf8.

MeSH terms

  • COVID-19 / metabolism
  • Carrier Proteins / metabolism
  • Host-Pathogen Interactions / physiology*
  • Humans
  • Metalloproteins / genetics
  • Metalloproteins / metabolism*
  • Nervous System Diseases / genetics*
  • SARS-CoV-2 / metabolism
  • SARS-CoV-2 / pathogenicity*
  • Viral Proteins / metabolism*

Substances

  • Carrier Proteins
  • Metalloproteins
  • ORF8 protein, SARS-CoV-2
  • Viral Proteins
  • zinc-binding protein