Molecular Docking and Biophysical Studies for Antiproliferative Assessment of Synthetic Pyrazolo-Pyrimidinones Tethered with Hydrazide-Hydrazones

Int J Mol Sci. 2021 Mar 8;22(5):2742. doi: 10.3390/ijms22052742.

Abstract

Chemotherapy represents the most applied approach to cancer treatment. Owing to the frequent onset of chemoresistance and tumor relapses, there is an urgent need to discover novel and more effective anticancer drugs. In the search for therapeutic alternatives to treat the cancer disease, a series of hybrid pyrazolo[3,4-d]pyrimidin-4(5H)-ones tethered with hydrazide-hydrazones, 5a-h, was synthesized from condensation reaction of pyrazolopyrimidinone-hydrazide 4 with a series of arylaldehydes in ethanol, in acid catalysis. In vitro assessment of antiproliferative effects against MCF-7 breast cancer cells, unveiled that 5a, 5e, 5g, and 5h were the most effective compounds of the series and exerted their cytotoxic activity through apoptosis induction and G0/G1 phase cell-cycle arrest. To explore their mechanism at a molecular level, 5a, 5e, 5g, and 5h were evaluated for their binding interactions with two well-known anticancer targets, namely the epidermal growth factor receptor (EGFR) and the G-quadruplex DNA structures. Molecular docking simulations highlighted high binding affinity of 5a, 5e, 5g, and 5h towards EGFR. Circular dichroism (CD) experiments suggested 5a as a stabilizer agent of the G-quadruplex from the Kirsten ras (KRAS) oncogene promoter. In the light of these findings, we propose the pyrazolo-pyrimidinone scaffold bearing a hydrazide-hydrazone moiety as a lead skeleton for designing novel anticancer compounds.

Keywords: G-quadruplex DNA; KRAS; antiproliferative activity; antitumor lead compound; circular dichroism; cytotoxic activity; epidermal growth factor receptor; hydrazide-hydrazone; molecular docking; pyrazolopyrimidinone.

MeSH terms

  • Antineoplastic Agents
  • Apoptosis / drug effects*
  • Breast Neoplasms* / drug therapy
  • Breast Neoplasms* / metabolism
  • Breast Neoplasms* / pathology
  • Cell Proliferation / drug effects*
  • Drug Screening Assays, Antitumor
  • ErbB Receptors / antagonists & inhibitors
  • ErbB Receptors / chemistry
  • ErbB Receptors / metabolism
  • Female
  • G-Quadruplexes*
  • Humans
  • MCF-7 Cells
  • Molecular Docking Simulation*
  • Proto-Oncogene Proteins p21(ras)* / antagonists & inhibitors
  • Proto-Oncogene Proteins p21(ras)* / chemistry
  • Proto-Oncogene Proteins p21(ras)* / metabolism
  • Pyrimidinones* / chemical synthesis
  • Pyrimidinones* / chemistry
  • Pyrimidinones* / pharmacology

Substances

  • Antineoplastic Agents
  • KRAS protein, human
  • Pyrimidinones
  • EGFR protein, human
  • ErbB Receptors
  • Proto-Oncogene Proteins p21(ras)