Towards virtual biopsies of gastrointestinal tissues using photoacoustic remote sensing microscopy

Benjamin R Ecclestone; Saad Abbasi; Kevan Bell; Deepak Dinakaran; Gilbert Bigras; John R Mackey; Parsin Haji Reza

doi:10.21037/qims-20-722

Towards virtual biopsies of gastrointestinal tissues using photoacoustic remote sensing microscopy

Quant Imaging Med Surg. 2021 Mar;11(3):1070-1077. doi: 10.21037/qims-20-722.

Authors

Benjamin R Ecclestone¹, Saad Abbasi¹, Kevan Bell^{1

2}, Deepak Dinakaran^{2

3}, Gilbert Bigras⁴, John R Mackey³, Parsin Haji Reza¹

Affiliations

¹ PhotoMedicine Labs, Department of Systems Design Engineering, University of Waterloo, Waterloo, Canada.
² illumiSonics Inc., Department of Systems Design Engineering, University of Waterloo, Waterloo, Canada.
³ Department of Oncology, University of Alberta, Edmonton, Canada.
⁴ Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Canada.

Abstract

Gastrointestinal (GI) tissue biopsies provide critical diagnostic information for a wide variety of conditions such as neoplastic diseases (colorectal, small bowel and stomach cancers) and non-neoplastic diseases (inflammatory disorders, infection, celiac disease). Endoscopic biopsies collect small tissue samples that require resource intensive processing to permit histopathological analysis. Unfortunately, the sparsely collected biopsy samples may fail to capture the pathologic condition because selection of biopsy sites relies on macroscopic superficial tissue features and clinician judgement. Here, we present the first all-optical non-contact label-free non-interferometric photoacoustic microscopy system capable of performing "virtual biopsies". A modular photoacoustic remote sensing (PARS™) architecture is used facilitating imaging of unprocessed tissues providing information similar to conventional histopathological staining techniques. Prospectively this would allow gastroenterologists to assess subcellular tissue morphology in situ when selecting biopsy location. Tested on preserved unstained human and freshly resected murine tissues, the presented PARS microscope rapidly retrieves images of similar area to current biopsies, while maintaining comparable quality to the current standard for histopathological analysis. Additionally, results show the first label free assessment of subsurface cellular morphology in FFPE GI tissue blocks. Clinically relevant features are recovered including cellular details such as lamina propria within colon tissue and cell nuclear structure in resected smooth muscle. Constructed with a modular architecture, this system facilitates the future development of compact imaging heads. The modular PARS system overcomes many of the challenges with imaging unstained thick tissue in situ, representing a significant milestone in the development of a clinical microscope providing virtual biopsy capabilities.

Keywords: Photoacoustic remote sensing microscopy (PARS); gastrointestinal (GI); histology; pathology; photoacoustics.