deepEA: a containerized web server for interactive analysis of epitranscriptome sequencing data

Plant Physiol. 2021 Feb 25;185(1):29-33. doi: 10.1093/plphys/kiaa008.

Authors

Jingjing Zhai^{1

2}, Jie Song^{1

2}, Ting Zhang^{1

2}, Shang Xie², Chuang Ma^{1

2}

Affiliations

¹ State Key Laboratory of Crop Stress Biology for Arid Areas, Center of Bioinformatics, College of Life Sciences, Northwest A&F University, Shaanxi, Yangling 712100, China.
² Key Laboratory of Biology and Genetics Improvement of Maize in Arid Area of Northwest Region, Ministry of Agriculture, Northwest A&F University, Shaanxi, Yangling 712100, China.

Abstract

The containerized web server deepEA allows interactive, reproducible, and collaborative analysis of epitranscriptome sequencing data.

Publication types

Letter
Research Support, Non-U.S. Gov't

MeSH terms

Computational Biology
Data Analysis
Epigenomics*
High-Throughput Nucleotide Sequencing
Plants / genetics*
RNA Processing, Post-Transcriptional
RNA, Plant / genetics
Sequence Analysis, RNA
Transcriptome*
User-Computer Interface*
Web Browser

Substances

RNA, Plant