Data on DNA-seq analysis of Endophytic Streptomyces sp. SUK 48

Siti Junaidah Ahmad; Noraziah Mohamad Zin

doi:10.1016/j.dib.2021.106768

Data on DNA-seq analysis of Endophytic Streptomyces sp. SUK 48

Data Brief. 2021 Jan 20:35:106768. doi: 10.1016/j.dib.2021.106768. eCollection 2021 Apr.

Authors

Siti Junaidah Ahmad^{1

2}, Noraziah Mohamad Zin¹

Affiliations

¹ Center for Diagnostic, Therapeutic and Investigative Studies, Faculty of Health Sciences, Universiti Kebangsaan Malaysia, Jalan Raja Muda Abd Aziz, 50300 Kuala Lumpur, Malaysia.
² Faculty of Health Sciences, Universiti Sultan Zainal Abidin, 21300, Kuala Nerus, Terengganu, Malaysia.

Abstract

The data genome sequence of SUK 48 consists of 8,341,706 bp, comprising of one contig with a high G + C content of 72.33%. The genome sequence encodes for 67 tRNAs and 21 rRNAs in one contig. SUK48 was found to have low similarities with other Streptomyces sp. (81-93% ANI indices) indicating that the isolated strain has a unique genome property and is presumably a novel species. This genome includes 34 genetic clusters responsible for the synthesis of secondary metabolites, including two polyketide synthase (PKS) clusters; one PKS type II cluster gene, one PKS gene cluster type III, five NRPS genetic clusters, and five PKS/NRPS hybrid clusters.

Keywords: Ethnomedicinal plant; SUK 48; Streptomyces sp.; Whole genome sequence.