Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8

Chinda Chhe; Ayaka Uke; Sirilak Baramee; Umbhorn Ungkulpasvich; Chakrit Tachaapaikoon; Patthra Pason; Rattiya Waeonukul; Khanok Ratanakhanokchai; Akihiko Kosugi

doi:10.1016/j.dib.2021.106784

Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8

Data Brief. 2021 Jan 22:35:106784. doi: 10.1016/j.dib.2021.106784. eCollection 2021 Apr.

Authors

Chinda Chhe^{1

2}, Ayaka Uke¹, Sirilak Baramee^{1

3}, Umbhorn Ungkulpasvich^{1

2}, Chakrit Tachaapaikoon³, Patthra Pason³, Rattiya Waeonukul³, Khanok Ratanakhanokchai⁴, Akihiko Kosugi^{1

2}

Affiliations

¹ Biological Resources and Post-Harvest Division, Japan International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba, Ibaraki 305-8686, Japan.
² Graduate School of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan.
³ Pilot Plant Development and Training Institute (PDTI), King Mongkut's University of Technology Thonburi (KMUTT), Bangkok 10150, Thailand.
⁴ Enzyme Technology Laboratory, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi (KMUTT), Bangkok 10150, Thailand.

Abstract

Thermophilic, facultatively anaerobic, xylanolytic bacterial strain DA-C8 (=JCM34211 =DSM111723), newly isolated from compost, shows strong beechwood xylan degradation ability. Whole-genome sequencing of strain DA-C8 on the Ion GeneStudio S5 system yielded 69 contigs with a total size of 3,110,565 bp, 2,877 protein-coding sequences, and a G+C content of 52.3 mol%. Genome annotation revealed that strain DA-C8 possesses debranching enzymes, such as β-L-arabinofuranosidase and polygalacturonase, that are important for efficient degradation of xylan. As inferred from 16S rRNA sequences and average nucleotide identity values, the closest relatives of strain DA-C8 are Paenibacillus cisolokensis and P. chitinolyticus. The genomic data have been deposited at the National Center for Biotechnology Information (NCBI) under accession number BMAQ00000000.

Keywords: Anaerobic bacteria; Draft genome; Facultative; Thermophilic; Xylan degradation.