Identification of circular RNA expression profiles and potential biomarkers for intracerebral hemorrhage

Epigenomics. 2021 Mar;13(5):379-395. doi: 10.2217/epi-2020-0432. Epub 2021 Jan 28.

Abstract

Aim: To investigate the expression profiles of circRNAs after intracerebral hemorrhage (ICH). Materials & methods: RNA sequencing and qRT-PCR were used to investigate and validate circRNA expression levels. Bioinformatics analysis was performed to explore potential functions of the circRNAs. Results: Expression levels of 15 circRNAs were consistently altered in patients with ICH compared with their expression levels in hypertension. Three circRNAs, hsa_circ_0001240, hsa_circ_0001947 and hsa_circ_0001386, individually or combined, were confirmed as promising biomarkers for predicting and diagnosing ICH. The circRNAs were involved mainly in lysine degradation and the immune system. Conclusion: This is the first study to report expression profiles of circRNAs after ICH and to propose that three circRNAs are potential biomarkers for ICH.

Keywords: RNA sequencing; biomarkers; circular RNA; functional analysis; intracerebral hemorrhage.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers / blood
  • Cerebral Hemorrhage / blood
  • Cerebral Hemorrhage / genetics*
  • Female
  • Humans
  • Hypertension / blood
  • Hypertension / genetics*
  • Integrins / metabolism
  • Lysine / metabolism
  • Male
  • MicroRNAs
  • Middle Aged
  • RNA, Circular / blood*
  • RNA, Messenger

Substances

  • Biomarkers
  • Integrins
  • MicroRNAs
  • RNA, Circular
  • RNA, Messenger
  • Lysine