Transient deSUMOylation of IRF2BP proteins controls early transcription in EGFR signaling

EMBO Rep. 2021 Mar 3;22(3):e49651. doi: 10.15252/embr.201949651. Epub 2021 Jan 22.

Abstract

Molecular switches are essential modules in signaling networks and transcriptional reprogramming. Here, we describe a role for small ubiquitin-related modifier SUMO as a molecular switch in epidermal growth factor receptor (EGFR) signaling. Using quantitative mass spectrometry, we compare the endogenous SUMO proteomes of HeLa cells before and after EGF stimulation. Thereby, we identify a small group of transcriptional coregulators including IRF2BP1, IRF2BP2, and IRF2BPL as novel players in EGFR signaling. Comparison of cells expressing wild type or SUMOylation-deficient IRF2BP1 indicates that transient deSUMOylation of IRF2BP proteins is important for appropriate expression of immediate early genes including dual specificity phosphatase 1 (DUSP1, MKP-1) and the transcription factor ATF3. We find that IRF2BP1 is a repressor, whose transient deSUMOylation on the DUSP1 promoter allows-and whose timely reSUMOylation restricts-DUSP1 transcription. Our work thus provides a paradigm how comparative SUMO proteome analyses serve to reveal novel regulators in signal transduction and transcription.

Keywords: ATF3; DUSP1; EGFR; IRF2BP1; SUMO.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carrier Proteins
  • Dual Specificity Phosphatase 1
  • ErbB Receptors / genetics
  • Gene Expression Regulation
  • HeLa Cells
  • Humans
  • Nuclear Proteins
  • Promoter Regions, Genetic
  • Signal Transduction*
  • Small Ubiquitin-Related Modifier Proteins / metabolism
  • Sumoylation*
  • Ubiquitin-Protein Ligases

Substances

  • Carrier Proteins
  • Nuclear Proteins
  • Small Ubiquitin-Related Modifier Proteins
  • IRF2BP1 protein, human
  • Ubiquitin-Protein Ligases
  • EGFR protein, human
  • ErbB Receptors
  • DUSP1 protein, human
  • Dual Specificity Phosphatase 1

Associated data

  • GEO/GSE135221
  • GEO/GSE161716