Key microRNAs and hub genes associated with poor prognosis in lung adenocarcinoma

Aging (Albany NY). 2021 Jan 10;13(3):3742-3762. doi: 10.18632/aging.202337. Epub 2021 Jan 10.

Abstract

In the study, we obtained 36 pairs of lung adenocarcinoma (LUAD) tissues and adjacent non-tumorous tissues. Then, we chose a specific hub-target gene of miRNA and used qRT-PCR to evaluate the expression of PECAM1. We found that the expression level of PECAM1 mRNA in LUAD was significantly lower than that in adjacent nontumor tissues (P<0.0001). Univariate and multivariate analyses were conducted on 481 LUAD patients from The Cancer Genome Atlas (TCGA) according to the Cox proportional hazard regression model to evaluate the impact of PECAM1 expression and other clinicopathological factors on survival. The results showed that the low expression of PECAM1 was an important independent predictor of poor overall survival (HR, 0.704; 95% CI, 0.518-0.957; P = 0.025). Based on the Tumor Immune Estimation Resource (TIMER) database, the relationship between PECAM1 expression and B cell, CD8+ T cell, CD4+ T cell, macrophage, neutrophil, and dendritic cell infiltration was weak in LUAD (P<0.01). In particular, a more significant positive correlation between PECAM1 expression and HLA-complex members, CD1C, NRP1, and ITGAX expression in dendritic cell was detected in LUAD. The mechanism which PECAM1 involved in the development of LUAD may be closely related to changes in the immune microenvironment.

Keywords: PECAM1; differentially expressed genes; differentially expressed miRNAs; lung adenocarcinoma; miRNA-mRNA regulatory network.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenocarcinoma of Lung / genetics*
  • Gene Regulatory Networks
  • Humans
  • Kaplan-Meier Estimate
  • Lung Neoplasms / genetics*
  • MicroRNAs / genetics*
  • Multivariate Analysis
  • Platelet Endothelial Cell Adhesion Molecule-1 / genetics*
  • Prognosis
  • Proportional Hazards Models
  • Protein Interaction Maps
  • RNA, Messenger / metabolism
  • Survival Rate

Substances

  • MicroRNAs
  • PECAM1 protein, human
  • Platelet Endothelial Cell Adhesion Molecule-1
  • RNA, Messenger