Opposite actions of two dsRNA-binding proteins PACT and TRBP on RIG-I mediated signaling

Biochem J. 2021 Feb 12;478(3):493-510. doi: 10.1042/BCJ20200987.

Abstract

An integral aspect of innate immunity is the ability to detect foreign molecules of viral origin to initiate antiviral signaling via pattern recognition receptors (PRRs). One such receptor is the RNA helicase retinoic acid inducible gene 1 (RIG-I), which detects and is activated by 5'triphosphate uncapped double stranded RNA (dsRNA) as well as the cytoplasmic viral mimic dsRNA polyI:C. Once activated, RIG-I's CARD domains oligomerize and initiate downstream signaling via mitochondrial antiviral signaling protein (MAVS), ultimately inducing interferon (IFN) production. Another dsRNA binding protein PACT, originally identified as the cellular protein activator of dsRNA-activated protein kinase (PKR), is known to enhance RIG-I signaling in response to polyI:C treatment, in part by stimulating RIG-I's ATPase and helicase activities. TAR-RNA-binding protein (TRBP), which is ∼45% homologous to PACT, inhibits PKR signaling by binding to PKR as well as by sequestration of its' activators, dsRNA and PACT. Despite the extensive homology and similar structure of PACT and TRBP, the role of TRBP has not been explored much in RIG-I signaling. This work focuses on the effect of TRBP on RIG-I signaling and IFN production. Our results indicate that TRBP acts as an inhibitor of RIG-I signaling in a PACT- and PKR-independent manner. Surprisingly, this inhibition is independent of TRBP's post-translational modifications that are important for other signaling functions of TRBP, but TRBP's dsRNA-binding ability is essential. Our work has major implications on viral susceptibility, disease progression, and antiviral immunity as it demonstrates the regulatory interplay between PACT and TRBP IFN production.

Keywords: PACT; RIG-I; RLRs; TRBP; dsRNA; virus sensor.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Adenosine Triphosphate / metabolism
  • Animals
  • Carrier Proteins / physiology*
  • DEAD Box Protein 58 / physiology*
  • Fibroblasts
  • Genes, Reporter
  • HEK293 Cells
  • Humans
  • Immunity, Innate
  • Interferon Regulatory Factor-3 / genetics
  • Interferon Regulatory Factor-3 / metabolism
  • Interferons / physiology
  • Mice
  • Models, Biological
  • Mutation
  • Phosphorylation
  • Poly I-C / pharmacology
  • Protein Binding
  • Protein Domains
  • Protein Processing, Post-Translational
  • RNA, Double-Stranded / metabolism
  • RNA-Binding Proteins / physiology*
  • Receptors, Immunologic / physiology*
  • Recombinant Fusion Proteins / metabolism
  • Recombinant Proteins / metabolism
  • Sequence Homology, Amino Acid
  • Signal Transduction / physiology*

Substances

  • Carrier Proteins
  • IRF3 protein, human
  • Interferon Regulatory Factor-3
  • PRKRA protein, human
  • RNA, Double-Stranded
  • RNA-Binding Proteins
  • Rbbp6 protein, mouse
  • Receptors, Immunologic
  • Recombinant Fusion Proteins
  • Recombinant Proteins
  • trans-activation responsive RNA-binding protein
  • Adenosine Triphosphate
  • Interferons
  • RIGI protein, human
  • Ddx58 protein, mouse
  • DEAD Box Protein 58
  • Poly I-C