Structural insights into a new substrate binding mode of a histidine acid phosphatase from Legionella pneumophila

Biochem Biophys Res Commun. 2021 Feb 12:540:90-94. doi: 10.1016/j.bbrc.2020.12.070. Epub 2021 Jan 12.

Abstract

MapA is a histidine acid phosphatase (HAP) from Legionella pneumophila that catalyzes the hydroxylation of a phosphoryl group from phosphomonoesters by an active-site histidine. Several structures of HAPs, including MapA, in complex with the inhibitor tartrate have been solved and the substrate binding tunnel identified; however, the substrate recognition mechanism remains unknown. To gain insight into the mechanism of substrate recognition, the crystal structures of apo-MapA and the MapAD281A mutant in complex with 5'-AMP were solved at 2.2 and 2.6 Å resolution, respectively. The structure of the MapAD281A/5'-AMP complex reveals that the 5'-AMP fits fully into the substrate binding tunnel, with the 2'-hydroxyl group of the ribose moiety stabilized by Glu201 and the adenine moiety sandwiched between His205 and Phe237. This is the second structure of a HAP/AMP complex solved with 5'-AMP binding in a unique manner in the active site. The structure presents a new substrate recognition mechanism of HAPs.

Keywords: Histidine acid phosphatase; Legionella pneumophila; Substrate recognition; X-ray crystallography.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acid Phosphatase / chemistry*
  • Acid Phosphatase / genetics
  • Acid Phosphatase / metabolism*
  • Adenine / metabolism
  • Amino Acid Sequence
  • Apoenzymes / metabolism
  • Catalytic Domain
  • Histidine / metabolism*
  • Legionella pneumophila / enzymology*
  • Legionella pneumophila / genetics
  • Models, Molecular
  • Mutation
  • Phenylalanine / metabolism
  • Protein Binding
  • Ribose / metabolism
  • Sequence Alignment
  • Substrate Specificity
  • Tartrates / metabolism

Substances

  • Apoenzymes
  • Tartrates
  • Phenylalanine
  • Histidine
  • Ribose
  • Acid Phosphatase
  • Adenine
  • tartaric acid