Transcriptome analysis of cepharanthine against a SARS-CoV-2-related coronavirus

Brief Bioinform. 2021 Mar 22;22(2):1378-1386. doi: 10.1093/bib/bbaa387.

Abstract

Antiviral therapies targeting the pandemic coronavirus disease 2019 (COVID-19) are urgently required. We studied an already-approved botanical drug cepharanthine (CEP) in a cell culture model of GX_P2V, a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-related virus. RNA-sequencing results showed the virus perturbed the expression of multiple genes including those associated with cellular stress responses such as endoplasmic reticulum (ER) stress and heat shock factor 1 (HSF1)-mediated heat shock response, of which heat shock response-related genes and pathways were at the core. CEP was potent to reverse most dysregulated genes and pathways in infected cells including ER stress/unfolded protein response and HSF1-mediated heat shock response. Additionally, single-cell transcriptomes also confirmed that genes of cellular stress responses and autophagy pathways were enriched in several peripheral blood mononuclear cells populations from COVID-19 patients. In summary, this study uncovered the transcriptome of a SARS-CoV-2-related coronavirus infection model and anti-viral activities of CEP, providing evidence for CEP as a promising therapeutic option for SARS-CoV-2 infection.

Keywords: COVID-19; GX_P2V; SARS-CoV-2; cellular stress; cepharanthine; transcriptome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antiviral Agents / pharmacology*
  • Benzylisoquinolines / pharmacology*
  • Chlorocebus aethiops
  • Homeostasis
  • Humans
  • SARS-CoV-2 / drug effects*
  • Transcriptome*
  • Vero Cells

Substances

  • Antiviral Agents
  • Benzylisoquinolines
  • cepharanthine