Synthesis and evaluation of sensitive coumarin-based fluorogenic substrates for discovery of α-N-acetyl galactosaminidases through droplet-based screening

Org Biomol Chem. 2021 Jan 28;19(4):789-793. doi: 10.1039/d0ob02484h. Epub 2021 Jan 7.

Abstract

As part of a search for a substrate for droplet-based microfluidic screening assay of α-N-acetylgalactosaminidases, spectral and physical characteristics of a series of coumarin derivatives were measured. From among these a new coumarin-based fluorophore, Jericho Blue, was selected as having optimal characteristics for our screen. A reliable method for the challenging synthesis of coumarin glycosides of α-GalNAc was then developed and demonstrated with nine examples. The α-GalNAc glycoside of Jericho Blue prepared in this way was shown to function well under screening conditions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chemistry Techniques, Synthetic
  • Coumarins / chemical synthesis*
  • Coumarins / chemistry*
  • Enzyme Assays / instrumentation*
  • Fluorescent Dyes / chemical synthesis*
  • Fluorescent Dyes / chemistry*
  • Lab-On-A-Chip Devices*
  • Substrate Specificity
  • alpha-N-Acetylgalactosaminidase / chemistry
  • alpha-N-Acetylgalactosaminidase / metabolism*

Substances

  • Coumarins
  • Fluorescent Dyes
  • coumarin
  • alpha-N-Acetylgalactosaminidase